Normalizing Illumina BeadChip expression data


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Documentation for package ‘illumina’ version 1.0.6

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illumina-package Normalizing Illumina BeadChip expression data
boxplotBeadStrips Boxplot for Strip Data for MouseWG-6 BeadChip
evst Empirical Variance Stabilization Transformation
fitmixture Fit Mixture Model by Non-Linear Least Squares
getBeadStrips Separate the Array Data into Strips for MouseWG-6 BeadChip
glmt Fit a Variance-Mean Model to Expression Data Using GLM and Transform the Data
illumina Normalizing Illumina BeadChip expression data
normBeadStrips Strip-level Normalization for MouseWG-6 BeadChip
normbycontrol Normalizing Microarray Data Using Control Probes
normexpbycontrol Normalizing Microarray Data Using Control Probes
read.illumina Read Illumina data
readallctrl Read control data for Illumina Whole Genome Expression BeadChips
readnegctrl Read control data for Illumina Whole Genome Expression BeadChips