This page gives links to software and supplementary materials for the following papers:

1. Robinson, MD and Smyth GK (2007)
   Moderated Statistical Tests for Assessing Differences in Tag Abundance,
   Bioinformatics. 23(21):2881-7.
   [R package - tar] [R package - windows] [Table of DE tags for Zhang et al. dataset] [Zhang et al. dataset] [R commands for Zhang analysis]
   
   The 'msage' software package is now called 'edgeR' and is available from the Bioconductor project, see the following link:
   http://www.bioconductor.org/packages/release/bioc/html/edgeR.html
   
   
2. Robinson, MD and Smyth, GK (2008)
   Small Sample Estimation of Negative Binomial Dispersion, with applications to SAGE data,
   Biostatistics. 9(2):321-32.
   [R package] [R commands]
   

[updated 11/06/2009].