Rank ID GeneSet BroadUrl Description PubMedID NumGenes Contributor Ontology GOID p.value p.adj vote.rank avg.rank med.rank min.pvalue min.rank avg.logfc avg.logfc.dir direction significance 1 M17752 GO_PROTON_TRANSPORTING_V_TYPE_ATPASE_COMPLEX http://www.broadinstitute.org/gsea/msigdb/cards/GO_PROTON_TRANSPORTING_V_TYPE_ATPASE_COMPLEX.html A proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across a concentration gradient. The resulting transmembrane electrochemical potential of H+ is used to drive a variety of (i) secondary active transport systems via H+-dependent symporters and antiporters and (ii) channel-mediated transport systems. The complex comprises a membrane sector (V0) that carries out proton transport and a cytoplasmic compartment sector (V1) that catalyzes ATP hydrolysis. V-type ATPases are found in the membranes of organelles such as vacuoles, endosomes, and lysosomes, and in the plasma membrane. 19/23 Gene Ontology CC GO:0033176 6.46193172008854e-07 5.7759728144176e-06 10 175.212121212121 41 1.95816174080302e-08 1 1.25144510294311 -1.1589645928754 -1 3.06615536902895 2 M17227 GO_ACTIN_FILAMENT_BUNDLE http://www.broadinstitute.org/gsea/msigdb/cards/GO_ACTIN_FILAMENT_BUNDLE.html An assembly of actin filaments that are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness. 83/106 Gene Ontology CC GO:0032432 1.94334692773781e-06 9.6320650041945e-06 30 162.060606060606 50 5.88893563278065e-08 17 2.00960850518039 2.07930767999163 1 5.20279840693455 3 M17676 GO_NEUROMUSCULAR_JUNCTION http://www.broadinstitute.org/gsea/msigdb/cards/GO_NEUROMUSCULAR_JUNCTION.html The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential. 91/122 Gene Ontology CC GO:0031594 8.27671335159808e-11 1.29966769115635e-09 30 114.636363636364 51 2.50809495513038e-12 7 2.15743801556458 2.40257928589378 1 8.53779633917546 4 M17707 GO_AP_TYPE_MEMBRANE_COAT_ADAPTOR_COMPLEX http://www.broadinstitute.org/gsea/msigdb/cards/GO_AP_TYPE_MEMBRANE_COAT_ADAPTOR_COMPLEX.html Any of several heterotetrameric complexes that link clathrin (or another coat-forming molecule, as hypothesized for AP-3 and AP-4) to a membrane surface; they are found on coated pits and coated vesicles, and mediate sorting of cargo proteins into vesicles. Each AP complex contains two large (a beta and one of either an alpha, gamma, delta, or epsilon) subunits (110-130 kDa), a medium (mu) subunit (approximately 50 kDa), and a small (sigma) subunit (15-20 kDa). 42/45 Gene Ontology CC GO:0030119 9.09948701884598e-06 2.05712138441615e-05 55 138 57 2.7574324742007e-07 3 1.12729842955919 -1.15625910417918 -1 2.87518003096895 5 M17336 GO_CONTRACTILE_FIBER http://www.broadinstitute.org/gsea/msigdb/cards/GO_CONTRACTILE_FIBER.html Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle. 205/299 Gene Ontology CC GO:0043292 7.25122666575084e-09 9.7975876576773e-08 25 180.454545454545 64 2.19734142158918e-10 15 2.00611102184456 1.42167103817656 0.333333333333333 6.38009515234171 6 M17217 GO_INTERMEDIATE_FILAMENT http://www.broadinstitute.org/gsea/msigdb/cards/GO_INTERMEDIATE_FILAMENT.html A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins. 81/224 Gene Ontology CC GO:0005882 6.77072753758143e-13 1.51299719205185e-11 35 180.939393939394 68 2.05173561744959e-14 12 2.74609384517935 1.53514173074482 0.333333333333333 14.0283768621364 7 M17059 GO_LATE_ENDOSOME_MEMBRANE http://www.broadinstitute.org/gsea/msigdb/cards/GO_LATE_ENDOSOME_MEMBRANE.html The lipid bilayer surrounding a late endosome. 110/129 Gene Ontology CC GO:0031902 1.2549492372644e-06 8.94060150277647e-06 25 167.69696969697 68 3.80287879045983e-08 1 1.17485511651853 -1.06349080912668 -1 3.23365060120515 8 M17381 GO_CLATHRIN_VESICLE_COAT http://www.broadinstitute.org/gsea/msigdb/cards/GO_CLATHRIN_VESICLE_COAT.html A clathrin coat found on a vesicle. 29/32 Gene Ontology CC GO:0030125 2.11415111916543e-06 9.75717711512718e-06 70 142.909090909091 70 6.40652510989145e-08 10 1.38528889885835 -1.46800970512785 -1 3.76976577781915 9 M17616 GO_ENDOPLASMIC_RETICULUM_QUALITY_CONTROL_COMPARTMENT http://www.broadinstitute.org/gsea/msigdb/cards/GO_ENDOPLASMIC_RETICULUM_QUALITY_CONTROL_COMPARTMENT.html A subcompartment of the endoplasmic reticulum in which proteins with improper or incorrect folding accumulate. Enzymes in this compartment direct proteins with major folding problems to translocation to the cytosol and degradation, and proteins with minor folding problems to the ER, to interact with chaperon proteins. 14/15 Gene Ontology CC GO:0044322 9.02182854277224e-05 0.000131042059583767 105 156.515151515152 75 2.73400703053609e-06 9 1.0648691492848 -1.05051365810185 -1 2.36791871935439 10 M17598 GO_MICROTUBULE_END http://www.broadinstitute.org/gsea/msigdb/cards/GO_MICROTUBULE_END.html Any end of a microtubule. Microtubule ends differ in that the so-called microtubule plus-end is the one that preferentially grows by polymerization, with respect to the minus-end. 27/27 Gene Ontology CC GO:1990752 1.0775204970947e-05 2.38037798027384e-05 30 154.636363636364 76 3.26523068627243e-07 15 1.55090872565977 0.641658760211241 0.333333333333333 3.43930852644594 11 M17465 GO_APICOLATERAL_PLASMA_MEMBRANE http://www.broadinstitute.org/gsea/msigdb/cards/GO_APICOLATERAL_PLASMA_MEMBRANE.html The apical end of the lateral plasma membrane of epithelial cells. 23/27 Gene Ontology CC GO:0016327 9.60928692313317e-07 7.88306588621377e-06 10 183.939393939394 78 2.91190648489367e-08 4 2.94159074755607 -3.16837777537092 -1 7.14700630278383 12 M17816 GO_CLATHRIN_ADAPTOR_COMPLEX http://www.broadinstitute.org/gsea/msigdb/cards/GO_CLATHRIN_ADAPTOR_COMPLEX.html A membrane coat adaptor complex that links clathrin to a membrane. 31/34 Gene Ontology CC GO:0030131 1.13504832934138e-06 8.56445557593947e-06 130 112.242424242424 78 3.43954228481508e-08 6 1.21545109533092 -1.2994849776898 -1 3.41226637482991 13 M17201 GO_IONOTROPIC_GLUTAMATE_RECEPTOR_COMPLEX http://www.broadinstitute.org/gsea/msigdb/cards/GO_IONOTROPIC_GLUTAMATE_RECEPTOR_COMPLEX.html A multimeric assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand-gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. 32/56 Gene Ontology CC GO:0008328 4.70269663193231e-06 1.35933668813566e-05 50 155.69696969697 79 1.42506283471578e-07 11 2.18246608456154 1.35111908857759 0.333333333333333 6.23329137040306 14 M16979 GO_I_BAND http://www.broadinstitute.org/gsea/msigdb/cards/GO_I_BAND.html A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end. 134/198 Gene Ontology CC GO:0031674 4.95479324869914e-08 5.53602861056577e-07 85 179.060606060606 79 1.50145253567555e-09 8 2.07579114006721 1.64557117251293 0.333333333333333 5.88110198430113 15 M17391 GO_MICROTUBULE_PLUS_END http://www.broadinstitute.org/gsea/msigdb/cards/GO_MICROTUBULE_PLUS_END.html The growing (plus) end of a microtubule. In vitro, microtubules polymerize more quickly at the plus end than at the minus end. In vivo, microtubule growth occurs only at the plus end, and the plus end switches between periods of growth and shortening, a behavior known as dynamic instability. 22/22 Gene Ontology CC GO:0035371 5.36888476685165e-06 1.4713783252551e-05 45 159.636363636364 81 1.6269390129156e-07 13 1.60372308897909 0.63722512262292 0.333333333333333 4.34677557011062 16 M17516 GO_CONDENSED_CHROMOSOME_OUTER_KINETOCHORE http://www.broadinstitute.org/gsea/msigdb/cards/GO_CONDENSED_CHROMOSOME_OUTER_KINETOCHORE.html The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions. 14/14 Gene Ontology CC GO:0000940 1.20865903526503e-05 2.56288649448534e-05 5 199.575757575758 83 3.66262460079587e-07 1 2.14612985393063 2.14612985393063 1 4.75166745152965 17 M17848 GO_VACUOLAR_MEMBRANE http://www.broadinstitute.org/gsea/msigdb/cards/GO_VACUOLAR_MEMBRANE.html The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell. 648/795 Gene Ontology CC GO:0005774 1.65278362715494e-06 8.94060150277647e-06 60 206.272727272727 83 5.50928315824998e-08 2 1.38476569587961 -1.26065629664566 -1 3.32268152304213 18 M17016 GO_FILOPODIUM_MEMBRANE http://www.broadinstitute.org/gsea/msigdb/cards/GO_FILOPODIUM_MEMBRANE.html The portion of the plasma membrane surrounding a filopodium. 19/22 Gene Ontology CC GO:0031527 3.89834601675466e-06 1.2204634516605e-05 35 93.7272727272727 83 1.18131920759552e-07 10 2.40663101641362 2.58062563016736 1 6.26241267166055 19 M17433 GO_CELL_CELL_ADHERENS_JUNCTION http://www.broadinstitute.org/gsea/msigdb/cards/GO_CELL_CELL_ADHERENS_JUNCTION.html An adherens junction which connects a cell to another cell. 68/93 Gene Ontology CC GO:0005913 4.09547302165935e-08 4.6656271089884e-07 15 212.69696969697 85 1.24105245544925e-09 11 2.26943741655995 2.56035590018493 1 6.78114702053386 20 M17284 GO_ACTOMYOSIN http://www.broadinstitute.org/gsea/msigdb/cards/GO_ACTOMYOSIN.html Any complex of actin, myosin, and accessory proteins. 93/116 Gene Ontology CC GO:0042641 5.17866271704734e-06 1.44480370531601e-05 70 171 86 1.56929567273445e-07 12 1.87697024019308 2.01563390813146 1 4.71983790323985