Using Our Discipline to Enhance Human Welfare
August 7 - 11, 2005

Analysis of Gene Expression Data Short Course, JSM2005

Terry Speed^1,2, Jean Yang³, Ben Bolstad² and James Wettenhall¹
Augst 6-7, 2005

1. Walter and Eliza Hall Institute of Medical Research
2. University of California, Berkeley
3. University of Sydney

Course Outline

• outline.pdf

Lecture Slides in PDF format

1. Introduction to gene expression studies
2. Annotation (Information in microarray data)
3. Practical aspects of assessing two-color spotted array quality
4. High-density short oligonucleotide (Affymetrix GeneChip®) arrays
5. Differential Expression
6. Design of microarray experiments
7. Clustering and classification
8. Genes and sets of genes
9. Other technologies for measuring gene expression