Supplementary Information:
RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR

Charity Law^1,2, Monther Alhamdoosh³, Shian Su¹,
Gordon K. Smyth^1,4 and Matthew E. Ritchie^1,2,4

1. The Walter and Eliza Hall Institute of Medical Research
2. Department of Medical Biology, The University of Melbourne
3. CSL Limited, Bio21 Institute, Parkville
4. School of Mathematics and Statistics, The University of Melbourne

Data

The mouse mammary cell RNA-seq data set used in this article is available for download from GEO [GSE63310]

Code

Rmarkdown code

html

Interactive plots from Glimma

MDS plot

Mean-difference (MD) plot