Gene Set Testing Report


Analysis Parameters

Total number of genes: 14165
Total number of samples: 9
Number of contrasts: 3
Base GSEA methods: camera (limma:3.33.3), safe (safe:3.17.0), gage (gage:2.27.1), padog (PADOG:1.19.0), plage (GSVA:1.25.3), zscore (GSVA:1.25.3), gsva (GSVA:1.25.3), ssgsea (GSVA:1.25.3), globaltest (globaltest:5.29.1), ora (stats:3.4.0), fry (limma:3.33.3)
P-value combine method: wilkinson
Sorting statistic: med.rank
Fold changes calculated: Yes
Gene IDs - Symbols mapping used: Yes
Organism: Mus musculus
Gene set collections: c2 Curated Gene Sets (5.2, 07 March 2017), c5 GO Gene Sets (BP) (5.2, 07 March 2017), c5 GO Gene Sets (CC) (5.2, 07 March 2017), c5 GO Gene Sets (MF) (5.2, 07 March 2017), KEGG Pathways (NA, 07 March 2017)
EGSEA version: 1.5.2
EGSEAdata version: 1.5.0

Analysis Results



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